CDS

Accession Number TCMCG078C19497
gbkey CDS
Protein Id KAG0484570.1
Location complement(join(18326440..18326554,18335143..18335262,18335346..18335476,18346562..18346705,18346783..18346884,18354567..18354773,18354883..18354999,18361862..18361951,18362478..18362705,18362792..18362914,18363038..18363123,18364007..18364166,18364346..18364456,18364559..18364663,18364775..18364849,18368050..18368145,18368231..18368371))
Organism Vanilla planifolia
locus_tag HPP92_008649

Protein

Length 716aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633886, BioSample:SAMN14973820
db_source JADCNL010000004.1
Definition hypothetical protein HPP92_008649 [Vanilla planifolia]
Locus_tag HPP92_008649

EGGNOG-MAPPER Annotation

COG_category S
Description Nuclear pore complex scaffold, nucleoporins 186/192/205
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14310        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006999        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0017056        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044611        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGCTCCGCACGAACTCTACTCCACAATCGACATGGCTCTATCCGGCCCCAGTCCGCCGTCGCCCGGCCAGCGGATATTGCTCTTGCACTCCATTCGAGCTTCCCGTTCTCTTTTCCAGTCTCTCCTCTGCTATCCGGGACCCAAGGCATCGGACAGAGCTCAGGTGCAGTCAAAAGAAGTCAGGTTGCCGGATTCGCAACTAATTTCCTTGGATGATGTGGATGTTCAAGTTGCATTGAAACTGAGTGACGATCTTCACCTTAATGAAATCGAGTGCATCCGCTTACTTGTTTATGCAAACAAAGAATGGATTCTCTTGGGGCGAGAGCCACTGGAGACCTATCGTCTTGCAGCAGGTCTTTGGTACATGGAGAGAAGGAATGTGATAACTTCTTTACACACACTTTTGCGGTCCATTGTGCTTGATCAAGGGCTGGAAGCTGATTTGTTGGCTGAAATTCAGAAATACCTAGATGACCTTTTGAACTCAGGGCTCAGACAGAGGCTTATTGCTATTATAAAGGAACTAAATCGTGATGAACCAGCAGGTTGTGGAGGGCCTCATGCTGAATGCTATGTCATTGACTTCAGAGGCACCATTGTTGATCGTAAAGCGGTTGTTTGTCATGAAAGATTGCTTCTTAGTCACTGCCTTGTTTTATCTGGACTCGTAGTGCGAATGAGTCCAAGAGATGTAACAGACGTTTTTGCAGTACTGAAAGAATGTGCTTCTGAACTTGATGATAATGATAACGATATAAAACTTCAGATAACATTCAGTTTAATGTTCTCCCTTATGCTAACTTTTGTGTCCGATGCTTTGAGTACACATTCTGCCAACGCATCTTTACTTTCCTTTGATTCCCTTTTCAGGACGGAGTTCCATAAATCTGTTATGGCATCTGGAAACAATCATAATGTAGAACAGTTTGTCGATGTTGTTAGACTTGCATGGGTAGTGCACATGATTTATAGTCAGGATGAGGGAACTACAAGGGAGGCCTCTTCTGGTTTTGAGTCGAGGGATTTGACAAATGTCTCTGCTTGCTTGGAAATTATCTGCACAAGGAATGTTTTCCACTTTCTGCTGGCTAATGTTCTCCAAACTCCAGCCTACCAGAATGATGATGAGGATATTGTATACGTGTATGATGGATACATGCACAAATTGATGATGTGCTTCCTTTCACACCCTCTCACTAGATGCAAGAGGCAACCAGAGCTATTACTTGGAAATGAAGATTTGTGGGCTTTTGTTAACTTTGCTGGAGAGGATCATACTAACATACCAACTCTTGTGGCCTTTTTAAAAATGTTAAAGACTCTGGCATCTACGGAGGAGGGTGCTTCAAAGGTTTTTGAGTTGCTCGATGGCAAAATGTTTCGAAGGATTGGGTGGGATACCTTATTTGACTGCTTATCTATTTATGATGAGAAGTTCAGGCATTCACTCCAGTCGTCAGGAGTTTCATTACCTGATATTCAAGAGGGTGATGCACAGGCACTTACTGCATATCTGAATCTTCTACAAAAGGTGGTAGAAAATGGAAATCCTACTGAAAGGAAGAAATGGTTTCCCGATATTGAACCATTATTTAAGCTTCTTAGTTATGAAAGTGTACCACCGGAAATGAAGGGTGCACTCCGTGATGCTATTTCTTCTTTCATTGGTATTTCTCCAGTTTTGAAAGACACTATTTGGGGCTACCTTGAAAAATATGACCTTCCTGTGGTAGTTGGATTGCCATCTGGAACAAGTGTGCTTCAGTTGCCATCACAAGTTTATGACATGCGATTTGAGCTTAATGAAGTTGAAGCAAGAATGGAAAGATATCCATCTACAATATCTTACCTCAACTTGCTAAATAGTTTGATTTCTCAAGAAACGGATGTGAGTGATAGAGGGCGAAGGTTTGTGGGCATATTTAGATTTATTTATGATCAAGTTTTTGGGCCTTTTCCTCTGAGAGCTTATGCTGATCCTAAAGAAAAATGGCAGTTGGTTATTGCTTGCCTGGAGCATTTCCATTTGGTCCTCAAGATGTATGACTTGCGGGATGAGGATATTATTAATGCCGTTGACATTTCCCAGCCATCGAAAGTGTCCCTCCAGCTTCCAACCTTGAAATTCAGTTCCCCATATTAG
Protein:  
MSAPHELYSTIDMALSGPSPPSPGQRILLLHSIRASRSLFQSLLCYPGPKASDRAQVQSKEVRLPDSQLISLDDVDVQVALKLSDDLHLNEIECIRLLVYANKEWILLGREPLETYRLAAGLWYMERRNVITSLHTLLRSIVLDQGLEADLLAEIQKYLDDLLNSGLRQRLIAIIKELNRDEPAGCGGPHAECYVIDFRGTIVDRKAVVCHERLLLSHCLVLSGLVVRMSPRDVTDVFAVLKECASELDDNDNDIKLQITFSLMFSLMLTFVSDALSTHSANASLLSFDSLFRTEFHKSVMASGNNHNVEQFVDVVRLAWVVHMIYSQDEGTTREASSGFESRDLTNVSACLEIICTRNVFHFLLANVLQTPAYQNDDEDIVYVYDGYMHKLMMCFLSHPLTRCKRQPELLLGNEDLWAFVNFAGEDHTNIPTLVAFLKMLKTLASTEEGASKVFELLDGKMFRRIGWDTLFDCLSIYDEKFRHSLQSSGVSLPDIQEGDAQALTAYLNLLQKVVENGNPTERKKWFPDIEPLFKLLSYESVPPEMKGALRDAISSFIGISPVLKDTIWGYLEKYDLPVVVGLPSGTSVLQLPSQVYDMRFELNEVEARMERYPSTISYLNLLNSLISQETDVSDRGRRFVGIFRFIYDQVFGPFPLRAYADPKEKWQLVIACLEHFHLVLKMYDLRDEDIINAVDISQPSKVSLQLPTLKFSSPY